The identification of circulating tumour DNA using MassARRAY technology in non-small-cell lung cancer (NSCLC).
By: Arutha Kulasinghe, Connor O'Leary, James Monkman, Vandhana Bharti, Darryl Irwin, Sanjay Dutta, Derek J Richard, Brett Hughes, Rahul Ladwa, Ken O'Byrne

Queensland University of Technology, Centre for Genomics and Personalised Health, School of Biomedical Sciences, Brisbane, Australia; Translational Research Institute, Brisbane, Australia; Institute for Molecular Bioscience, University of Queensland, Brisbane, QLD, Australia; Princess Alexandra Hospital, Woolloongabba, Brisbane, Australia. Electronic address: Arutha.kulasinghe@qut.edu.au.
2021-03-28; doi: 10.1016/j.lungcan.2021.08.005
Abstract

Objectives

Attaining tumour material from lung cancer patients can be challenging with limited sample availability. Therefore, non-invasive means of assessing tumour material is becoming increasingly more important. Circulating tumour DNA (ctDNA), extracted from a blood sample is appealing for the patient, and can be performed serially over the course of treatment.

Materials

Here, we describe an approach for profiling the blood samples of 103 NSCLC patients for 73 variants in ctDNA across a panel of actionable lung cancer mutations using the UltraSEEK lung Panel (Agena Biosciences).

Results

Our cross-sectional study showed tumour and blood concordance in the detection of KRAS mutations (G12C, G12D, G12A/V, G12R, G12RC, Q61H) in 17/27 (63%), EGFR mutations (e746_a750del, e747_A750, T790M, L861Q) in 16/20 (80%) with additional PIK3CA_p545K mutations across both cohorts. In patients without reported tumour mutations, 11/56 (19.6%) presented with plasma mutations across EGFR, KRAS and PIK3CA. Where ctDNA mutations were measured longitudinally (n = 4 patients), the individual mutations mirrored the response to therapy/progression of disease.

Conclusion

Whilst preliminary, this study demonstrates the utility of detecting clinically actionable mutations in the blood samples of NSCLC patients at the time of presentation, and over the course of therapy.



Copyright © 2021 The Author(s). Published by Elsevier B.V. All rights reserved.

PMID:34455214






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